A B C D F G H I J M O P Q R S T U V W

C

CFILE_FORMATS - Static variable in class IMPACT.FileFormatConverter

Collection of format names, only for ConTest.

close() - Method in class IMPACT.GUIInitializationBox

Close this window.

CLUSTAL_F - Static variable in class IMPACT.FileFormatConverter

CLUSTAL format name

CLUSTAL_TYPE - Static variable in class IMPACT.FileFormatConverter

CLUSTAL format type

CONTEST_KEY - Static variable in class IMPACT.Utilities

Key for access ConTest executable absolute location

ConTestTask - Class in IMPACT

Implementation of background task for ConTest execution.

convert(File, String, File, String) - Method in class IMPACT.FileFormatConverter

Convert from file with format, to file with format.

convert_totmp(String[]) - Method in class IMPACT.FileFormatConverter

Creation of a temporary file, for phyml submission.

Temporary file must be of format Phylip (Interleaved or Sequential).

If source file, is of any other format convert to either Interleaved or Sequential according to user choice in phyml options.

countSelected(boolean[]) - Method in class IMPACT.ResultsSummary

Count selected sequences.

CSVTableModel - Class in IMPACT

Implementation of specific Table Model for Comma Separated Values files.